Insertion junction: CLIP2.019083_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019083
Chromosome:chromosome 2
Location:3490913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099050 SRR30 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain; Scavenger receptor cysteine-rich protein 3'UTR
Cre02.g099055 (1 of 18) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTTCAGCGGCAACCGGGCCAGTCGGCTGGCGGGGGCACTGCTGGTA
Internal bar code:TCGGTGCCCTTCAATGTAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATGTTCATGCATGGCG
Suggested primer 2:TGACGCTAACCAACTCCACC