Insertion junction: CLIP2.019083_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019083
Chromosome:chromosome 2
Location:3490913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099050 SRR30 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain; Scavenger receptor cysteine-rich protein 3'UTR
Cre02.g099055 (1 of 18) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGCAGCGTGCCGTTGGTCACCTGCTGGCGCCATACAGCGTGGCGA
Internal bar code:GTTGGCCGAACCGCGCGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGCTAACCAACTCCACC
Suggested primer 2:CCTGATGTTCATGCATGGCG