Insertion junction: CLIP2.019085_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019085
Chromosome:chromosome 2
Location:4912760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110000 (1 of 1) PF07974//PF13920 - EGF-like domain (EGF_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAACCCCAGGATGGAGGTGCAACAGTCGTCCCATCACAGAGTTTGCAC
Internal bar code:TTTGCGGTCAACTAATCTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGGCCTCCAACTGTCAT
Suggested primer 2:TTGAGCTGCCACACCTACAG