Insertion junction: CLIP2.019087_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019087
Chromosome:chromosome 1
Location:2469624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGCCTAACAGGTAAGGATCCGGGGCACATAGCGGGGTTACGTTTTA
Internal bar code:TCGTATCCTGAAAGGTTGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCATGGATCGCAAATGGC
Suggested primer 2:GTCCGCACAACACACTTCAC