Insertion junction: CLIP2.019090_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019090
Chromosome:chromosome 6
Location:5061548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGAAATGCACCCGCTAACGCGGCCCTGCGCGAGAGGTCTCGAGTTC
Internal bar code:TAGTTTTTTTAGTCGGCACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCTCTTCCCTGGAAAT
Suggested primer 2:CGTGTGTGCATGTGTGTACG