Insertion junction: CLIP2.019091_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019091
Chromosome:chromosome 7
Location:3746237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338150 RNP1,ChlMEI2g,MEI2,AML1 MEI2 RNA binding protein; (1 of 2) K17579 - protein phosphatase 1 regulatory subunit 42 (PPP1R42, LRRC67) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCGGCGTGGACGCGGACCTGGACTCGCTGGGGGCGGACATCGCATCC
Internal bar code:GAGGTTGCCGGCTATAGCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2081
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGTTGTGCAAAGCGAT
Suggested primer 2:CGGCGAACAATGCGACTAAG