Insertion junction: CLIP2.019102_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019102
Chromosome:chromosome 9
Location:1148943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACGTGAGCTGCCTCCGTGGCAGTGGCTGCGAGAAACAGCATCAGCA
Internal bar code:GATTACTATGGTTAGTGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2633
LEAP-Seq percent confirming:63.8298
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCTCCAGTGTCGCCTG
Suggested primer 2:CAATATCAGGGAGCCCGACC