Insertion junction: CLIP2.019105_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019105
Chromosome:chromosome 17
Location:5911480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741850 HNR1 Heterogeneous nuclear ribonucleoprotein; (1 of 1) K12898 - heterogeneous nuclear ribonucleoprotein F/H (HNRNPF_H) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGAACTTGCGCTTGCGGGCGGTCAACGATCTGGGCGAGCGATGGCGC
Internal bar code:GTTCGTTTAAACAGTTGAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGCCTCGCGTCAAAATC
Suggested primer 2:CCTCACACGCGGATCTAGAC