Insertion junction: CLIP2.019125_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019125
Chromosome:chromosome 6
Location:4797047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279900 MOT14,VFL3 Variable Flagella Number 3; (1 of 1) K16755 - coiled-coil domain-containing protein 61 (CCDC61) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCCCCGCCCCCGGCTGTTGCTGCGGCTGTCCGCTCCCCGTGTTGGCG
Internal bar code:TAATCTAGATGCTATAGAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGAGGTGTTGCTAGTG
Suggested primer 2:CCTTCTATGCGTGCTAGCGA