Insertion junction: CLIP2.019127_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019127
Chromosome:chromosome 3
Location:5901939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188750 HEL21 (1 of 1) K13177 - ATP-dependent RNA helicase DDX1 [EC:3.6.4.13] (DDX1); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGTTGATGCAGATGCGGCCAGCCATGTCCTTCACCTCGGGCGAGTG
Internal bar code:TTTACGGCCGGATAGCGACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACATGTGGTCCAACAC
Suggested primer 2:GGGGTGTGAGATGAAGGGTG