Insertion junction: CLIP2.019138_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019138
Chromosome:chromosome 12
Location:6363048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537150 (1 of 20) IPR008972 - Cupredoxin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGCGTACTCGCACCCGCCAACCCAGCCGTCCGCCACTCCGCCCGCCC
Internal bar code:AATCCAAGCGATTCACTATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:245
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTTGTAGTTGTGCACG
Suggested primer 2:TCGTCGCATATCTCAACCGG