Insertion junction: CLIP2.019142_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019142
Chromosome:chromosome 10
Location:4942832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454000 (1 of 2) IPR000157//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCGCACAGGCAGCAGGTGGCGGCGGCGGCGGTCACGCACGCCGTCA
Internal bar code:GTGGTCGCGGAAGGAGCAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTCAAACAGCACCTTG
Suggested primer 2:GCCAGTGGGTTCCATCATCA