Insertion junction: CLIP2.019144_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019144
Chromosome:chromosome 13
Location:842703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567300 (1 of 1) PTHR18968//PTHR18968:SF86 - THIAMINE PYROPHOSPHATE ENZYMES // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACAGAACCCCAGAGCCACAAGCCCAATCCCAAGTAAGCCCAAGCCCA
Internal bar code:TAGGTTTTGCCTCTATTGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3507
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGTGTGTGTGTGTAC
Suggested primer 2:CAACAATGCGTGCGGTTGTA