Insertion junction: CLIP2.019156_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019156
Chromosome:chromosome 3
Location:3627601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168250 (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCAAGGCTAGCGAGGCTTACTTCGTGTGGCTGGCGGGTGCGTGCGTGC
Internal bar code:CTGTAGTGTGCGGCTATAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCCCTTTGTGTTGTGG
Suggested primer 2:GTGCGTGTGTACCTGTCTCA