Insertion junction: CLIP2.019160_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019160
Chromosome:chromosome 9
Location:2615393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392251 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGACGGGTGAGTCACGCGCAAAGCTTACCCACGTGCCGCACTTTGCAC
Internal bar code:GGGTAATATACGGCTAATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1803
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGGCCCCACAATACAT
Suggested primer 2:CCCTACCTGCACCTCTACCT