Insertion junction: CLIP2.019164_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019164
Chromosome:chromosome 2
Location:1019606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079926 PHC64 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCTCCTCCTGTGCCGCCTAGCCCGGAGCCGCCGAGCCCAGAGCCTC
Internal bar code:TGTATGCCAAGTCTCCGGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2613
LEAP-Seq percent confirming:91.8919
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGCCATAGCATGCAAAC
Suggested primer 2:CTTCGTCTGCGCCTCCTAG