Insertion junction: CLIP2.019166_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019166
Chromosome:chromosome 2
Location:6848580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTCAACTGTTGCGCAGGTGATGGCGGCGCTCGAGACGGAAGCGGAG
Internal bar code:CGGATGGGCGCCCCGTCCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAACATCGCCTCCTCCTA
Suggested primer 2:CATGGAGGTCGACGACAGAG