Insertion junction: CLIP2.019174_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019174
Chromosome:chromosome 1
Location:3745279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024400 TRS85 Component of TRAPP complex, TRS85-like; (1 of 1) PF12739 - ER-Golgi trafficking TRAPP I complex 85 kDa subunit (TRAPPC-Trs85) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGATCGAGGTGAGCTGGAAGCTTTCCTCAAGTATGCACGGGGGAAGT
Internal bar code:GTAATATGCTACATAGGATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4750
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTATTCAGGGCAAGGC
Suggested primer 2:TCTTGACCTGCTGCTGTTGT