Insertion junction: CLIP2.019175_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019175
Chromosome:chromosome 8
Location:361747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358575 TRP7 Transient receptor potential ion channel protein; (1 of 1) IPR000104//IPR002110//IPR005821//IPR020683 - Antifreeze protein, type I // Ankyrin repeat // Ion transport domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGACGAGGTCCTCACCGACCACACGACCCACCAGCCCCGGCACCCACA
Internal bar code:TGTGCTCTAATTTGTCTTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3903
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGGTATTCAGAGGCCG
Suggested primer 2:AGGACGTGTGCTGCATTGTA