Insertion junction: CLIP2.019181_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019181
Chromosome:chromosome 3
Location:6810793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197250 (1 of 1) PTHR13948//PTHR13948:SF25 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGGGGACGGGATGGCCGTGGTGGTGGCGGCCGCGAAGGAGGTGTG
Internal bar code:CTGGTTGGGTTCAGTTCATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1625
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCTCCGCAAGTGTGTTA
Suggested primer 2:GTCGCATAGCATGTGGGGTA