Insertion junction: CLIP2.019188_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019188
Chromosome:chromosome 3
Location:8103679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201000 (1 of 1) PTHR33477:SF2 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCTACCGGTCATCAACGTGCGCTACGGCAACTTTGGAGAGGCACTG
Internal bar code:CTCGTGCAAATGGGCAATAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4941
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACATACACTCGCGCACATG
Suggested primer 2:GATTGATGGAAACGCAGCCC