Insertion junction: CLIP2.019189_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019189
Chromosome:chromosome 8
Location:1182137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363150 (1 of 2) PTHR23301//PTHR23301:SF0 - CHITIN BINDING PERITROPHIN-A // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACCACACGAGCCGCGCTGGGTTATCGCAGTTTTGGCCCACTTCCTC
Internal bar code:GAGTGCTTAATGTGAATTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCAACACTCGCTGTGGTC
Suggested primer 2:CGAATCGCGTTGACGAACTC