Insertion junction: CLIP2.019191_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019191
Chromosome:chromosome 7
Location:3539215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336350 (1 of 1) PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCAGGTGAGCGGCAGCTGCGGCGGTAGCACAAGCAGATAGGACTTCA
Internal bar code:ATGTTGACGCTAGTCGCCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2103
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGGATCCTTGCTTGCAT
Suggested primer 2:GCCATCCATAGGCCCCATAC