Insertion junction: CLIP2.019195_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019195
Chromosome:chromosome 2
Location:5784444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116950 HDA1 RPD3/HDA1 type histone deacetylase; (1 of 2) 3.5.1.4 - Amidase / Acylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGACGCCGCTGAGCGACTGGAGCGCCGCCAGCCCGCAGAAGGGCACT
Internal bar code:CAAATAACTGGTTGTAAGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:739
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGGATTTCGGAGTGGA
Suggested primer 2:CTGCCTTACACTGCTCCACA