Insertion junction: CLIP2.019195_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019195
Chromosome:chromosome 2
Location:5784453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116950 HDA1 RPD3/HDA1 type histone deacetylase; (1 of 2) 3.5.1.4 - Amidase / Acylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCCCTGGCTGCACGAGGTCAGCGCCTGGGGGTACCAGGACCTGCAG
Internal bar code:CAAATAACTGGTTGTAAGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTTACACTGCTCCACA
Suggested primer 2:CGTGTGGATTTCGGAGTGGA