Insertion junction: CLIP2.019198_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019198
Chromosome:chromosome 16
Location:438007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693250 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGGAGCTGTTTGAAGCCGCTCTTGAGGCCGGGAACTGGGCCACTGC
Internal bar code:GAGTCAGAACGGTCAGCGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1979
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCTACAAGTGCCTCCA
Suggested primer 2:GTCTGCAAGCGCTTCAAACA