Insertion junction: CLIP2.019199_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019199
Chromosome:chromosome 6
Location:4681260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278700 Conserved Ankyrin-Repeat Protein; (1 of 1) PTHR24193:SF69 - IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574 HOMOLOG-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGCCGCCGCGTGCATGTCATCGGCTGGGGTTGCATCCTTACGCCTG
Internal bar code:TGGTCACTAACTCTCATATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1813
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCTCTCACACACAGCAC
Suggested primer 2:TACGACACGTGCGTTGGTAA