Insertion junction: CLIP2.019213_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019213
Chromosome:chromosome 16
Location:6758407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672602 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTCGGTCATGCGCCGATTCATGGCGCGGTGGATGCCGTACAGGTC
Internal bar code:TAGAACTGTGACTGGTTTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTGCTGTGCAGTCAAC
Suggested primer 2:TTAGGCACTTCACAGGCTCG