Insertion junction: CLIP2.019214_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019214
Chromosome:chromosome 4
Location:1754531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g211950 ELG32 Exostosin-like glycosyltransferase 32; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACCACACCAAAACTCACGCACGCCCACACTCACACACGCCCGCCCGC
Internal bar code:ATTGAGGGGGTATATAAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:800
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGCTCACCACCTTGTA
Suggested primer 2:CACTCACCTTCACCACTCCC