Insertion junction: CLIP2.019217_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019217
Chromosome:chromosome 6
Location:1039193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800615 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGCGGCGGTGCTGGCGGCTTGCCACAACCGACGCGGGGCCCGTCGG
Internal bar code:ATTGCACTTCCAGTGGGGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3030
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCCAGGCCGTTCATCAC
Suggested primer 2:GCACAACTTCGCTTTCCAGG