Insertion junction: CLIP2.019220_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019220
Chromosome:chromosome 9
Location:2711556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391600 MEP1 Putative IgA-specific metalloendopeptidase CDS
Cre09.g391650 HCP4 (1 of 4) 1.7.99.1 - Hydroxylamine reductase / Hydroxylamine (acceptor) reductase; Hybrid-cluster protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCTGGTGCTGGTTGGCGCGCCGCGGCCTGCGGCGGAGGCGGCCGCT
Internal bar code:CGTAGTCTCACGATGGTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2496
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTCCATCCCCATAGCT
Suggested primer 2:CAGCATCACCACCACTAGCA