Insertion junction: CLIP2.019233_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019233
Chromosome:chromosome 12
Location:8554667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549000 PHC4 Pherophorin-chlamydomonas homolog 4; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACCGGCGCCCCAAGGCCACGCCCTTTGCGCTGGACCCTACCATCCG
Internal bar code:CAGATGTATTGATCTCTAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CAGATCTGGGGCTTGTTGGT
Suggested primer 2:TCTGCATCACCCTCAACACC