Insertion junction: CLIP2.019234_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019234
Chromosome:chromosome 6
Location:6491640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294050 (1 of 2) PTHR22640:SF2 - STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAATGTTGCCATTCCATCATTTACCTCATGCCGCCCGCAATCCCCTT
Internal bar code:GGGTCCAGGGAATAGAAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1336
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGTATATGGTGGGCGG
Suggested primer 2:CGTCATGGCTTCTCCCAGTT