Insertion junction: CLIP2.019236_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019236
Chromosome:chromosome 5
Location:863188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246200 (1 of 2) PTHR24347//PTHR24347:SF159 - SERINE/THREONINE-PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE STK11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGATTCCCCAAGCCGCTGCCGACACCACCGCTATTGTGTGGCGTCA
Internal bar code:GCTCGAAGGAGATTTGTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGTTCTCTGCAGCTGAT
Suggested primer 2:GGTTGTCAAGGTGCGTGAAC