Insertion junction: CLIP2.019240_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019240
Chromosome:chromosome 15
Location:668581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637100 (1 of 1) K04523 - ubiquilin (UBQLN, DSK2); DSK2 homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCAACCCGGCCATGCGCGAGCTCATGGAGCGAAACCCCGAGGTGGGC
Internal bar code:TTATAGACCGGACTGGGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GATATAACCGCGCACCCTGA
Suggested primer 2:TTTTGCTGTCATCCCTCCCC