Insertion junction: CLIP2.019256_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019256
Chromosome:chromosome 4
Location:3963339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231516 (1 of 1) PTHR23315//PTHR23315:SF84 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGGAATTTACAACCCCCCGCCCCACCTCTACCCCGCCCACCTGCAG
Internal bar code:AATTTGCCACAACTCAGCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGAGGGGAGAAAGGAT
Suggested primer 2:AAATGTGCTAGGGGGTCGTG