Insertion junction: CLIP2.019275_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019275
Chromosome:chromosome 12
Location:6005521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534350 HCD2 (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD; 3-hydroxyacyl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGGATGATGCCCACATGGGGGAGTCGCCCTGGTTATATCTGCGCGTG
Internal bar code:TCATGTTTTCTACGGCACTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCGACTCTTTGAAGCAC
Suggested primer 2:AAGACCTCCTTCTTGAGCGC