Insertion junction: CLIP2.019277_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019277
Chromosome:chromosome 9
Location:1507430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399551 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTGGCGGCGGGCGGTGCACGCCTTGTGGCCAGTGGCGGCGTGCGGGC
Internal bar code:GCGCTGAGTTTAAGTTTCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4339
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCATCCAATCCCACCAA
Suggested primer 2:CCCAGGAGCATGTTCGAGAG