Insertion junction: CLIP2.019278_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019278
Chromosome:chromosome 4
Location:1883557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218200 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCACGCTGCCCGACGCAGCGGCCGAGGTCAGCACCTCCTCCTGCAG
Internal bar code:TAGTAAAAAATCGACGAATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGATCGCGTGACAGGGTTTT
Suggested primer 2:AGGATATCCCTGGCGACACT