Insertion junction: CLIP2.019281_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019281
Chromosome:plastome
Location:164354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802324 tic214,orf1995,ycf1,2717035,ChreCp059 Forms with TIC20, TIC56 and TIC100 the 1-MD complex mediating chlorolast protein import CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATAATCAGTTAATAATTCTTCATGGAAATATAAATTGTCTTTTAGTTT
Internal bar code:ATAAGAATCCGGGATAGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2275
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTACGTCGTGGTTTCCGT
Suggested primer 2:TGCTTTGTACGCCACCATTG