Insertion junction: CLIP2.019287_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019287
Chromosome:chromosome 1
Location:3292412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021150 TRMC2,TMU1 (1 of 2) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase; tRNA (uracil-5-)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGTGGTGGTGGGAGCTGAGGCTGTAGAAGGTGGCGAGAACCGGTTT
Internal bar code:TAGGGGTTAGATGGCCGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCGTCAATCTTGTCCT
Suggested primer 2:ACCACCATCACAGCACTCAG