Insertion junction: CLIP2.019289_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019289
Chromosome:chromosome 17
Location:3848225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGTCGTCGTGCGCTGCAACGCCTGGCGCAGGCTCTGGAGCCACTGCT
Internal bar code:ACTTCTCATGATGTGGTAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGCAGAGCCTTCCAACC
Suggested primer 2:GAGACTGAGAGCCTGCAGTG