Insertion junction: CLIP2.019316_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019316
Chromosome:chromosome 5
Location:1035675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247500 (1 of 2) IPR001841//IPR013083//IPR018957 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, C3HC4 RING-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCATGATCACCAACGCAACCTGCGCCTGCAGCGCCCTCGCTCCCGC
Internal bar code:GCGGACTTTCATTGGTCGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTCGTTTTGCAGCTTC
Suggested primer 2:CACCCGTCCAATAGCCTGAC