Insertion junction: CLIP2.019320_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019320
Chromosome:chromosome 3
Location:6297868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192000 SEC13L,SEH1 COP-II coat subunit, nucleoporin; (1 of 1) K14299 - nucleoporin SEH1 (SEH1) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCACCAGCGCGCCATGGGGCGGTGAAGCCGCAAGGGTGAACGGCTAA
Internal bar code:ATCCCATTCCGTCCGGTCCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2420
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCAATTCTGTTGGCG
Suggested primer 2:CATGTTGGAGAAGGTGGGCT