Insertion junction: CLIP2.019327_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019327
Chromosome:chromosome 3
Location:306942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144484 CDPK10 Calcium/calmodulin-dependent protein kinase; (1 of 4) PTHR24349//PTHR24349:SF121 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAGGGGCAAGTATGGTAGTGTGTTGGTACCCTGCATGCATCCCTTG
Internal bar code:TGGTTATGCTAGCTAGGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCATACTTGCTGCATGC
Suggested primer 2:CCTCTCATCCACGACATCGG