Insertion junction: CLIP2.019330_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019330
Chromosome:chromosome 17
Location:230056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697406 (1 of 45) IPR029052 - Metallo-dependent phosphatase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCGCGACAGGAGCTCAAGCAGGGTGTAGTAGGCTCCGGACAGGTTG
Internal bar code:GTCGAAGGAGTAGATTGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGCCAAGAAATGCAAAA
Suggested primer 2:ATCCGAGTCAGACAACGAGC