Insertion junction: CLIP2.019338_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019338
Chromosome:chromosome 8
Location:3556266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379350 TPT10,TPT phosphate/phosphoenolpyruvate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTGGGATGTGGGCCGAGGCGTCGTGGAGCAGCAGGGCGAGCGGCGC
Internal bar code:TGCGTCTAACAAGCGTAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTCCACACCCTGCCCTT
Suggested primer 2:CCGACCCACATCACAACTCA