Insertion junction: CLIP2.019347_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019347
Chromosome:chromosome 16
Location:6175221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATTGCACTCTGTTGCACTCCGTTGCACTCCGAACACACCATGCCCT
Internal bar code:TTGAAAAAACCCGTCGTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:10651
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGGAGCGTACGAGGAG
Suggested primer 2:TTTGCCAACAAGCTGATGCC