Insertion junction: CLIP2.019362_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019362
Chromosome:chromosome 17
Location:1191195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704600 (1 of 1) PTHR21346:SF0 - PROTEIN T06D8.7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCGCTTAAACGCCCGCAGGCGGCCCTGAGCAGGGCCCTTCCGGTGGC
Internal bar code:AGCACGAAGGCGCAGCCAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4929
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGACAAACCGAGCTCAT
Suggested primer 2:GCACGGTTTATCGGAATGGC