Insertion junction: CLIP2.019369_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019369
Chromosome:chromosome 1
Location:7591416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800139 (1 of 1) IPR026741//IPR026937//IPR027417 - Protein strawberry notch // Strawberry notch, helicase C domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAAAGGATCGCGCGGCCATGGCCTACCTGCATGGCTCGGTGAAACTT
Internal bar code:TCTTGAAGTCCTGATAAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1680
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGTCGTCGTCGTCATC
Suggested primer 2:GTCTGGAGGACCTGGAGGAT